rs8255322 SNP Detail

Summary

• ID
  rs8255322
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:140506875 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        TTTTC CGACGCTCAG CACCTAGCCC
  R
  GGAAGGATCC CACAGCCTGA AGATG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	BALB/cByJ	BALB/cJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	NZW/LacJ	PWD/PhJ	SPRET/EiJ
ss12751410	AF087797_AN333_1	ROCHEBIO	RPAMM	f	SNP	G	A	A	A	A	G	G	G	A	A	A			G
ss38483726	NES09764961	PERLEGEN	MM_PANEL2	r	SNP			T									T	C
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	BALB/cByJ	BALB/cJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	NZW/LacJ	PWD/PhJ	SPRET/EiJ
rs8255322					SNP	G	A	A	A	A	G	G	G	A	A	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38483726	NES09764961	PERLEGEN	MM_PANEL	r	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:140506875 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi22974	CpG island 22974	1788 bp distal
Cpgi22975	CpG island 22975	170 bp proximal
Gm15295	predicted gene 15295	720 bp upstream
Irs4	insulin receptor substrate 4	within coordinates
Rr3101	regulatory region 3101	126 bp proximal
Rr8325	regulatory region 8325	1074 bp distal
Rr8326	regulatory region 8326	within coordinates
Tssr164271	transcription start site region 164271	1302 bp downstream