rs8255325 SNP Detail

Summary

• ID
  rs8255325
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:140506260 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        AAGAA CGCAAAGAAG CCAAAGAGGT
  R
  AGAGATATGG AGACCTCAGG AGGTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12751413	AF087797_AN334_2	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8255325					SNP	A	A	A	A	A	A	A	A	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:140506260 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi22974	CpG island 22974	1173 bp distal
Cpgi22975	CpG island 22975	785 bp proximal
Gm15295	predicted gene 15295	1335 bp upstream
Irs4	insulin receptor substrate 4	within coordinates
Rr3101	regulatory region 3101	741 bp proximal
Rr8325	regulatory region 8325	459 bp distal
Rr8326	regulatory region 8326	within coordinates
Tssr164271	transcription start site region 164271	1917 bp downstream