rs8255326 SNP Detail

Summary

• ID
  rs8255326
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:140506244 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CAAAG AGGTAAGAGA TATGGAGACC
  Y
  CAGGAGGTGC TACCCGGGGG CCTTA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
ss12751414	AF087797_AN334_3	ROCHEBIO	RPAMM	f	SNP	T	C	C	T	C	C	T	T	T		C	C	C		C
ss46487258	mCV23421654	ABI	CRAMUS_MOUSE	r	SNP			G				A
ss134477627	ENSMUSSNP4075300	ENSEMBL	ENSEMBL_Sanger	r	SNP			G
ss325981672	CHEV_X_138157791	CHEVERUD	SCREENING_POP	r	SNP										G				A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
rs8255326					SNP	T	C	C	T	C	C	T	T	T	C	C	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:140506244 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi22974	CpG island 22974	1157 bp distal
Cpgi22975	CpG island 22975	801 bp proximal
Gm15295	predicted gene 15295	1351 bp upstream
Irs4	insulin receptor substrate 4	within coordinates
Rr3101	regulatory region 3101	757 bp proximal
Rr8325	regulatory region 8325	443 bp distal
Rr8326	regulatory region 8326	within coordinates
Tssr164271	transcription start site region 164271	1933 bp downstream