rs8255330 SNP Detail

Summary

• ID
  rs8255330
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:140505580 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                              ACCTGGAAAA TTCCTGGGGA
  GCGGTCTACA CAAAGAAGCC TCCTTTAGCC AGGGCACCAA AAATGTGTCT TCAAAGCCTT
  CAACTGAGGC GTCATTCTCA AAACCCGAAG ATAAAGGGTC ATCTGCAAAG CCTTCAGATG
  ATGTGCCCCC AATGAACAAG GCTAAGGAAC CTAACCACCT TTCTTTTATT GCAAAAGGAA
  S
  TCAAGTAAAG CCCAAACCGC TAAACCCCAC ACAGGAGCGG AGAGAAGCTG CTGGCTCCCG
  TGACTATATC AACATTGACT TTATTAAGAG AGAGCGCCTT GTGCTACCTT CCTCTGCTCA
  AGGACTGCCA GACATGCGGG GCGTAGTTAC TGACCCCGCA CCCACAGCTT TTTCTGGCTA
  CCTGAATGTT GAATTCGGGG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12751418	AF087797_AN335_4	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8255330					SNP	C	C	C	C	C	C	C	C	C	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:140505580 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi22974	CpG island 22974	493 bp distal
Cpgi22975	CpG island 22975	1465 bp proximal
Irs4	insulin receptor substrate 4	within coordinates
Rr3101	regulatory region 3101	1421 bp proximal
Rr8325	regulatory region 8325	within coordinates
Rr8326	regulatory region 8326	620 bp proximal
Rr9264	regulatory region 9264	1780 bp distal