rs8255336 SNP Detail

Summary

• ID
  rs8255336
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:140506089 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CTCAA AATTCCTCTG CTTCAACAAA
  R
  CGCCACTCTA GGTCACCCTT TGAAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	BALB/cByJ	BALB/cJ	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12751424	AF087797_AN341_1	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	BALB/cByJ	BALB/cJ	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8255336					SNP	A	A	A	A	A	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:140506089 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi22974	CpG island 22974	1002 bp distal
Cpgi22975	CpG island 22975	956 bp proximal
Gm15295	predicted gene 15295	1506 bp upstream
Irs4	insulin receptor substrate 4	within coordinates
Rr3101	regulatory region 3101	912 bp proximal
Rr8325	regulatory region 8325	288 bp distal
Rr8326	regulatory region 8326	111 bp proximal