rs8255880 SNP Detail

Summary

• ID
  rs8255880
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:80016843 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATGATGTT TATGAGCAGT
  TAGGTAAATT TTTATATGCA TTGAATACTA TTTGGGAACA CTGGGTTCCT TTTTTAGTTT
  ATCAGACTTA TTACTGAAAC CAGTTCATTA CAATCCCAAA CTTGAAACCG TAAGCTAGCC
  CAGCAAATCT TTTTCTCCCT TATAACTGGA ATACTTCATC TGAGCACCCA AATGAGGTTC
  R
  GCTTTAACTT ATAAACATTT TTTACCACCT AAACAATTTA CCTTTAAATT CGCTAATCTC
  TAAAACCTAC TGCAGTTGTT AAATCAGCCA TAAATTCTTA GGGGACAACT GACTTTATGG
  TCCATTCTAA AGTGGGAGGC CCATCAACAG GCAGGCAGAA AGCCTCATCC AGGGCTATAA
  AGGAGTTGAA GCATTTTTCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12751989	Cyp1b1_AN2655_1	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8255880					SNP	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:80016843 () rs orientation: forward

Symbol	Name	Function Class
Cyp1b1	cytochrome P450, family 1, subfamily b, polypeptide 1	within coordinates
Tssr149448	transcription start site region 149448	1895 bp upstream
Tssr149449	transcription start site region 149449	1755 bp upstream