rs8255881 SNP Detail

Summary

• ID
  rs8255881
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr17:80016896 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGAACACTG GGTTCCTTTT
  TTAGTTTATC AGACTTATTA CTGAAACCAG TTCATTACAA TCCCAAACTT GAAACCGTAA
  GCTAGCCCAG CAAATCTTTT TCTCCCTTAT AACTGGAATA CTTCATCTGA GCACCCAAAT
  GAGGTTCGGC TTTAACTTAT AAACATTTTT TACCACCTAA ACAATTTACC TTTAAATTCG
  M
  TAATCTCTAA AACCTACTGC AGTTGTTAAA TCAGCCATAA ATTCTTAGGG GACAACTGAC
  TTTATGGTCC ATTCTAAAGT GGGAGGCCCA TCAACAGGCA GGCAGAAAGC CTCATCCAGG
  GCTATAAAGG AGTTGAAGCA TTTTTCCAAG CAAGCTGTCT CTTGGTAGGA GGACTTCTGG
  TCTTTACATT TTACACTGAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12751990	Cyp1b1_AN2655_2	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8255881					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:80016896 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cyp1b1	cytochrome P450, family 1, subfamily b, polypeptide 1			Intron
				mRNA-UTR
Tssr149448	transcription start site region 149448			1948 bp upstream
Tssr149449	transcription start site region 149449			1808 bp upstream