rs8255882 SNP Detail

Summary

• ID
  rs8255882
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:80017042 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGGCTTTAAC TTATAAACAT
  TTTTTACCAC CTAAACAATT TACCTTTAAA TTCGCTAATC TCTAAAACCT ACTGCAGTTG
  TTAAATCAGC CATAAATTCT TAGGGGACAA CTGACTTTAT GGTCCATTCT AAAGTGGGAG
  GCCCATCAAC AGGCAGGCAG AAAGCCTCAT CCAGGGCTAT AAAGGAGTTG AAGCATTTTT
  Y
  CAAGCAAGCT GTCTCTTGGT AGGAGGACTT CTGGTCTTTA CATTTTACAC TGAAATCACA
  TGTCTTTGAA TCTTGGGTAT ATCCTAAGCC TTTGCTTACT GCAGTTTCCT ATGGGGTCAA
  TTTCTGCACA TAGAAGTTCC CTCACAAATC TACCCAAAAA GGCAGAATTA CTGAAATACT
  TTCTTAGATA GTTGTGCATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12751991	Cyp1b1_AN2655_3	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8255882					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:80017042 () rs orientation: forward

Symbol	Name	Function Class
Cyp1b1	cytochrome P450, family 1, subfamily b, polypeptide 1	within coordinates
Tssr149449	transcription start site region 149449	1954 bp upstream