rs8256126 SNP Detail

Summary

• ID
  rs8256126
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:60939310 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        ATAAC GAAGAGATGA AACACTTGGC
  M
  CCACACCGGA CACACATTTC CTCTA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12752287	X13414_JC651_8	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8256126					SNP	C	C	C	C	C	C	C	C	C	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:60939310 () rs orientation: reverse

Symbol	Name	Function Class
Cd74	CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	within coordinates
D18Mit77	DNA segment, Chr 18, Massachusetts Institute of Technology 77	1997 bp distal
Rr405670	regulatory region 405670	1079 bp downstream
Rr405671	regulatory region 405671	281 bp downstream
Rr405672	regulatory region 405672	274 bp upstream
Tssr5344	transcription start site region 5344	1433 bp upstream
Tssr151328	transcription start site region 151328	1221 bp downstream
Tssr151329	transcription start site region 151329	1150 bp downstream
Tssr151330	transcription start site region 151330	270 bp downstream
Tssr151331	transcription start site region 151331	251 bp downstream
Tssr151332	transcription start site region 151332	759 bp upstream
Tssr151333	transcription start site region 151333	1297 bp upstream
Tssr151334	transcription start site region 151334	1661 bp upstream
Tssr151335	transcription start site region 151335	1670 bp upstream
Tssr151336	transcription start site region 151336	1704 bp upstream
Tssr151337	transcription start site region 151337	1758 bp upstream
Tssr151338	transcription start site region 151338	1814 bp upstream
Tssr151339	transcription start site region 151339	1993 bp upstream
Tssr153493	transcription start site region 153493	1817 bp downstream
Tssr153494	transcription start site region 153494	1839 bp downstream