rs8256147 SNP Detail

Summary

• ID
  rs8256147
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:62312940 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCGTTCCTGA GTGACGTCGT
  GGTCTGGCGC TCGGCTTCCG TTGGGTGCCA GCAAGAAGTC GCTGTCGTTC CCGTGTGGCC
  CCATGGCTGG CAGGTTAGCA GGTGAGCGCA CCGGCTTTCG GTGCCCAGGC GCTCTCAGCG
  GGTGCACCTC CGACGGGGCG CAGCCGGCCG GGGGCGGACT CCTGGAAGCT TCATTCAGCG
  R
  CCGTAGGTGG CTGTGCTGGG GTGCGTCCTG CACACTCAGC TCGTGGGTGC TCCGGGCTCG
  CGGTGCCTGC AGCCGCAGCC TGAATGCCTG AGAAGCAGCC TTGCAGTGCG CCCTGCCCGT
  TATGTGCACC AGACTTTAGG GGAATTGCCC AGTGACGTGC AACAACTTTG GGCCAATGGC
  ACGGCCGGAT GCCCGGAGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss12752310	X15643_JC692_1	ROCHEBIO	RPAMM	f	SNP		G	A		G		G	G
ss50422440	NES13457476	PERLEGEN	MM_PANEL2	f	SNP	G	G	A	G		G		G	G	G	G	G	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs8256147					SNP	G	G	A	G	G	G	G	G	G	G	G	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50422440	NES13457476	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:62312940 () rs orientation: forward

Symbol	Name	Function Class
Adrb2	adrenergic receptor, beta 2	within coordinates
Cpgi10125	CpG island 10125	within coordinates
Gm9949	predicted gene 9949	166 bp upstream
Rr393783	regulatory region 393783	within coordinates
Rr539064	regulatory region 539064	957 bp distal
Rr539065	regulatory region 539065	846 bp distal
Rr539066	regulatory region 539066	80 bp proximal
Rr539067	regulatory region 539067	337 bp proximal
Tssr151487	transcription start site region 151487	250 bp upstream
Tssr153623	transcription start site region 153623	79 bp downstream