rs8257200 SNP Detail

Summary

• ID
  rs8257200
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:25596049 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTTTTTAT TTCCTTTTAG
  CAAGAGGGAA GGTCAGAGAA CTTCCTGTGC TGTGAAAACA ACAAGGAGGA TGAGTGGAAC
  CATTTGTCCT TAGACACAGT GGTCAGAGAC AATCTGAGTT AGGGTCTCTA TTTCTGTGAT
  AAAACTTCTA CAGGCAACTT GGGGAGGAAA GGATATATTT TGCTTGCAAT TTATAGTTTA
  Y
  CATCCAAGGA AGTCGGGGCA GGAACACAAG GCAGGAAGCT GGAGGCAATG CAGAGGCCAT
  GGAGGGATGC TGCTTACTCA TCATGGCTTG CTCAGCCTGG TTTCTTATAG AACCCAGGAT
  CACCAGTCCA GGGATGAAAT TTCCCACGGT GACTTAGGCC CTCCAACATC CAATCGCTGA
  TTAAGAAAAC ACTCTAAAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129S1/SvImJ	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12753381	Cyp2b10_1_JC3927_14	ROCHEBIO	RPAMM	f	SNP	C			T	T	T	T	T	T	T	T	C	T	T	T	T	C
ss46136453	mCV22773158	ABI	CRAMUS_MOUSE	f	SNP		C	C		T						T
ss148606352	ENSMUSSNP6278286	ENSEMBL	ENSEMBL_Sanger	f	SNP			C		T
SNP Consensus Information
SNP					Consensus Type	129/Sv	129S1/SvImJ	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8257200					SNP	C	C	C	T	T	T	T	T	T	T	T	C	T	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:25596049 () rs orientation: forward

Symbol	Name	Function Class
Cyp2b10	cytochrome P450, family 2, subfamily b, polypeptide 10	1034 bp upstream
Rr164529	regulatory region 164529	1005 bp distal
Rr164530	regulatory region 164530	723 bp proximal
Tssr65172	transcription start site region 65172	1027 bp upstream