rs8257209 SNP Detail

Summary

• ID
  rs8257209
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:25597079 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTTGTCCT ATGTATCTGT
  TTCATGGTGT CCTTGCCAAC ATCTACAGTG AGGGTAAGGG AATGAGGAGT GAGCAGCCAA
  AGCAGGGAGT TGCTATGGCT CCTCACGCTC TGGACAATGA GAGACAGGAG GCGGGAACAG
  CTGAAGTTGC ATAACTGAGT GGAGAGGCGG GGCCAGCATA AAAGATCCTG CTGGAGCGTG
  S
  AGTGAAGTCA ACATTGGTTA GACCAGGACC ATGGAGCCCA GTGTCCTGCT CCTCCTTGCT
  CTCCTTGTGG GCTTCTTGTT ACTCTTAGCC AGGGGACACC CAAAGTCCCG TGGCAACTTC
  CCACCAGGAC CCCGTCCCCT GCCCCTCTTG GGGAACCTCT TGCAGATGGA CAGAGGAGGC
  CTCCTCAAGT CTTTTATTCA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12753403	Cyp2b10_1_JC3930_4	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	G	G	G	G	C	G	G	G	G	C
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8257209					SNP	G	G	G	G	G	G	G	G	G	C	G	G	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:25597079 () rs orientation: forward

Symbol	Name	Function Class
Cyp2b10	cytochrome P450, family 2, subfamily b, polypeptide 10	4 bp upstream
Rr164530	regulatory region 164530	within coordinates
Tssr65172	transcription start site region 65172	within coordinates
Tssr65173	transcription start site region 65173	1921 bp upstream