rs8257482 SNP Detail

Summary

• ID
  rs8257482
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:78240823 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCAGGCCAG TTTTCCTTAA
  CATCTCTTCA GCAGCCTCCT CCTCTCCACC CTCCATCNNT CTCCNTGNTC AGATATTTCC
  CCTCTGTCTT TGTTGCCCTA TCATATCCTC CTGATGGGCA GCTGCTCTCA GGCCTCCCTG
  TGTAACNAGA ATGTTTTCCC NTCTGTTGTT CACTGCAGTT CTCTGTGGAA GGGAAGCCCA
  TTGTGTTCTG TAGGACCCAG GTCCTTCTCT NGNGTGGCTC AGCCTTCCAC AGNCCCAGTG
  Y
  TGNTTGTGGC CANGAAGCCT NTTGAATNNT GGATNCTAGA CTGGCATGAG CATCCATTGC
  TCCTTCCAGG CCATTTTTAC ACAGTGCCCT GGGGGGCAAG ANCTACACAG CAAAA     
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/HeJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	LP/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
ss12753728	Gsta1_4_JC6043_8	ROCHEBIO	RPAMM	f	SNP	C		C	C	C	C					C	C			T
ss24752708	Gsta1_JC6043_10	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	A/HeJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	LP/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
rs8257482					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:78240823 () rs orientation: forward

Symbol	Name	Function Class
Gm70238	predicted gene, 70238	within coordinates
Gsta2	glutathione S-transferase, alpha 2 (Yc2)	within coordinates
Tssr2946	transcription start site region 2946	234 bp downstream