rs8257487 SNP Detail

Summary

• ID
  rs8257487
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:78240858 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCCTATCAT AACCTCCTGA
  TGGGCAGCTG CTCTCAGGCC TCCCTGTGTA ACAGAATGTT TTCCCATCTG TTGTTCACTG
  CAGTTCTCTG TGGAAGGGAA GCCCATTGTG TTCTGTAGGA CCCAGGTCCT TCTCTGGTGT
  GGCTCAGCCT TCCACAGGCC CAGTGCTGGT TGTGGCCAAG AAGCCTGTTG AATTCTGGAT
  R
  CTAGACTGGC ATGAGCATCC ATTGCTCCTT CCAGGCCATT TTTACACAGT GCCCTGGGGG
  GCAAGAGCTA CACAGCAGGC TCATGGAAGT GAAGGCCAGT GTAGCAGTAG CCTTTGTCTC
  CCAGCCTCTG CCTTTCTCTT GTCCCTGAAA CTCAGTGTCC CCAGACTTCA AAGAGCCTAC
  TTACCTTTTC AAAGGCAGGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/HeJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
ss12753733	Gsta1_4_JC6043_13	ROCHEBIO	RPAMM	f	SNP	A		A	A	A	A				A	A			G
ss24752714	Gsta1_JC6043_16	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/HeJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
rs8257487					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:78240858 () rs orientation: forward

Symbol	Name	Function Class
Gm70238	predicted gene, 70238	within coordinates
Gsta2	glutathione S-transferase, alpha 2 (Yc2)	Intron
Tssr2946	transcription start site region 2946	269 bp downstream