rs8257488 SNP Detail

Summary

• ID
  rs8257488
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:78241079 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                     GG GCANGATGTC CTCAGCAGGC TCATGGAAGT GAAGGCCAGT
  GTAGCAGTAG CCTTTGTCTC CCAGCCTCTG CCTTTCTCTT GTCCCTGAAA CTCAGTGTCC
  CCAGACTTCA AAGAGCCTAC TTACCTTTTC AAAGGCAGGC AAGTAACGGT TTTTGGTCCT
  R
  TCTTTTGCCA AGGCAGTCTT GGCTTCTCTT TGGTCTGGGG GACATAATAC CAATTGCCCA
  ATCATTTCAG TCAGATCTAA AATACCTTCT GNATACATGT CAATCCTAAA AGACAAAAGT
  TTCCAAATTN TCAAGAATCT CCTATTGTAC ATAATAAT                        
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	C3H/HeJ	CAST/EiJ	DBA/2J	MRL/MpJ	NZW/Lac	SM/J
ss12753734	Gsta1_4_JC6044_1	ROCHEBIO	RPAMM	f	SNP	A		A		A	G		A
ss24747272	Gsta1_JC6044_1	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	C3H/HeJ	CAST/EiJ	DBA/2J	MRL/MpJ	NZW/Lac	SM/J
rs8257488					SNP	A	A	A	A	A	G	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:78241079 () rs orientation: forward

Symbol	Name	Function Class
Gm70238	predicted gene, 70238	within coordinates
Gsta2	glutathione S-transferase, alpha 2 (Yc2)	within coordinates
Tssr2946	transcription start site region 2946	490 bp downstream