rs8258833 SNP Detail

Summary

• ID
  rs8258833
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:25597420 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCCCTCTTG GGGAACCTCT
  TGCAGATGGA CAGAGGAGGC CTCCTCAAGT CTTTTATTCA GGTGAGAACA ATATGAGGTC
  TTAGTGTGGG TTTCCCCCTG CTTTTGTTTT CGGAGGTCAC TCATCAGGAA GAGCAAGAGA
  CTCCTTCCAC GGTGTAGGTT CAGGTGGGAA GGTTGCTGAG GGGAGGGTGA GATGCTGATT
  Y
  GTGGTGGATG GTACTCAGAT AGACAGGCAA ATCTTGCTAC GTTGGAGTTG TGTGGGGGCA
  CTTGTGCTTG GGCTTCGAGA GGCGTAGAGG CGTTGAGGTG TGAGCGTGCA GAATTTCACT
  CCTTGGAGCT TGTCTGTTCC AGAAGAGAAA GAAAAATATC AGAGGCATCA ACATGAAGGC
  TTGCTTCTGC CAGCAAGAGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	C3H/HeJ	C57BL/6J	MRL/MpJ	SPRET/EiJ
ss12755164	Cyp2b10_1_AN2678_1	ROCHEBIO	RPAMM	f	SNP	T	T	T	T	T	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	C3H/HeJ	C57BL/6J	MRL/MpJ	SPRET/EiJ
rs8258833					SNP	T	T	T	T	T	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:25597420 () rs orientation: forward

Symbol	Name	Function Class
Cyp2b10	cytochrome P450, family 2, subfamily b, polypeptide 10	within coordinates
Rr164530	regulatory region 164530	170 bp distal
Tssr65172	transcription start site region 65172	323 bp downstream
Tssr65173	transcription start site region 65173	1580 bp upstream