rs8258835 SNP Detail

Summary

• ID
  rs8258835
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:25597492 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGAGGTCTT AGTGTGGGTT
  TCCCCCTGCT TTTGTTTTCG GAGGTCACTC ATCAGGAAGA GCAAGAGACT CCTTCCACGG
  TGTAGGTTCA GGTGGGAAGG TTGCTGAGGG GAGGGTGAGA TGCTGATTTG TGGTGGATGG
  TACTCAGATA GACAGGCAAA TCTTGCTACG TTGGAGTTGT GTGGGGGCAC TTGTGCTTGG
  R
  CTTCGAGAGG CGTAGAGGCG TTGAGGTGTG AGCGTGCAGA ATTTCACTCC TTGGAGCTTG
  TCTGTTCCAG AAGAGAAAGA AAAATATCAG AGGCATCAAC ATGAAGGCTT GCTTCTGCCA
  GCAAGAGATT AGCCTGAGGT GTTCTAGGAC AAAGGGGAAG AGAGGCAGAA CAGGAGGAGG
  GGTGGGTAGG AGTGTTATCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129S1/SvImJ	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	C3H/HeJ	C57BL/6J	DBA/2J	MRL/MpJ	SPRET/EiJ
ss12755166	Cyp2b10_1_AN2678_3	ROCHEBIO	RPAMM	f	SNP	A			G	G	G	G	G	G	G	G	A
ss46059815	mCV22773156	ABI	CRAMUS_MOUSE	f	SNP		A	A		G				G
ss148606362	ENSMUSSNP4629767	ENSEMBL	ENSEMBL_Sanger	f	SNP			A		G
SNP Consensus Information
SNP					Consensus Type	129/Sv	129S1/SvImJ	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	C3H/HeJ	C57BL/6J	DBA/2J	MRL/MpJ	SPRET/EiJ
rs8258835					SNP	A	A	A	G	G	G	G	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:25597492 () rs orientation: forward

Symbol	Name	Function Class
Cyp2b10	cytochrome P450, family 2, subfamily b, polypeptide 10	within coordinates
Rr164530	regulatory region 164530	242 bp distal
Tssr65172	transcription start site region 65172	395 bp downstream
Tssr65173	transcription start site region 65173	1508 bp upstream