rs8259691 SNP Detail

Summary

• ID
  rs8259691
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:107848107 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAAACACAT TCTTCACATA
  ATCTGCATAC TGCAGGTCCT GGGCCGGAAA CCCAAGCTGT TTAAAGGCCT GACTTTCTTT
  TTGGCACAAA TCAGGAAGAG ACACTGAATG TTGCTCTTAG AAGCCAAAAG CAGTTGGGAG
  CCCAGAACAG CCTCTACTCG TGCTAGGATG CTGAGCAAGT AGCTTACCCT ACACAGTCTC
  R
  TGTTCCTTAT CTGTTCATCG TGACAGCTAA TTCTACCCAG GTTGCCTGCG TGTGGCAATG
  ACAAATTGAC TCCGCAGATC TAGAAGGCTG AACATGGGTC CTGGCAGAAA GTCAGTGCTC
  AATAGATCAG AACTAGGGAA GCAACCTGGA AAGGGGGAAG GGAAGTAGGG CATCCAAGAG
  GAAGCAGGAC CAGGGCATCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12756079	Gstm6_2_AN4436_5	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8259691					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107848107 () rs orientation: forward

Symbol	Name	Function Class
Gstm6	glutathione S-transferase, mu 6	Intron
Rr583091	regulatory region 583091	916 bp distal