CCATTGTGCT CTAGCATCTG AGGTCATATC GTCAACCGCG TGCTATTGGG AGGTTGGCCA ACTCTAGCCT AGAGCCACCA GTACGCTAGA ATCTATGTGC AAGGTAACTG TACATTAGCA TTGCCTAGAC TATGGAGGAC TCTGTAAGTC AAGCAACTTT GTCTTAGGCC CAGTAGGAGC ATCTGCCTCC GGAATGACAC R TAGCCTTTTC CTCTCCGATA GCCATTTATC CCAGCCGTGG TCAGGTTTTG CTGACGCAGC ACCTTGGTTT GATTCCTGGC AGCTCTGGCT GGCCCCTTAA TATTTCTAAG GCTGTTTCCT CATCTGCACA ACAGGCTATT CGCTGTACAT GGAATTGCTG TGAGCTTGCC TAGCATATGT AAAGTTCTCA GGCAAGCAAC R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129/Sv |
129S1/SvImJ |
A/HeJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
C57BL/6J |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
MRL/MpJ |
NOD/ShiLtJ |
NZB/BlNJ |
NZW/Lac |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss12757942 | Mgst3_1_AN4491_1 | ROCHEBIO | RPAMM | f | SNP | G | G | G | G | G | G | A | G | G | G | G | ||||||||||
ss60342643 | NES15844337 | PERLEGEN | MM_PANEL2 | f | SNP | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | ||||||
SNP Consensus Information | ||||||||||||||||||||||||||
SNP | Consensus Type | 129/Sv |
129S1/SvImJ |
A/HeJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
C57BL/6J |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
MRL/MpJ |
NOD/ShiLtJ |
NZB/BlNJ |
NZW/Lac |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs8261364 | SNP | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss60342643 | NES15844337 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr1:167200453 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm71125 | predicted gene, 71125 | 1277 bp upstream | ||||||
Mgst3 | microsomal glutathione S-transferase 3 | Intron | ||||||
Rr422702 | regulatory region 422702 | 1133 bp proximal | ||||||
Rr422703 | regulatory region 422703 | 1288 bp proximal | ||||||
Tssr14852 | transcription start site region 14852 | 462 bp upstream | ||||||
Tssr14853 | transcription start site region 14853 | 637 bp downstream | ||||||
Tssr14854 | transcription start site region 14854 | 1657 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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