rs8261850 SNP Detail

Summary

• ID
  rs8261850
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30123046 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        GGAGA AGTGTCCCTG CAATGTAAAG
  R
  AAATGAATTT ATGAATCTGG AAGAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C57BL/6J	CAST/EiJ	DBA/2J	SPRET/EiJ
ss12758483	IKBns_JC7152_18	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C57BL/6J	CAST/EiJ	DBA/2J	SPRET/EiJ
rs8261850					SNP	G	G	G	G	G	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30123046 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi18799	CpG island 18799	813 bp distal
Cpgi18800	CpG island 18800	89 bp distal
Nfkbid	nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, delta	within coordinates
Rr400239	regulatory region 400239	1767 bp downstream
Rr400240	regulatory region 400240	1188 bp downstream
Rr644814	regulatory region 644814	1879 bp distal
Rr644815	regulatory region 644815	1205 bp distal
Rr644816	regulatory region 644816	336 bp distal
Tssr2184	transcription start site region 2184	273 bp downstream
Tssr65714	transcription start site region 65714	1879 bp downstream
Tssr65715	transcription start site region 65715	1326 bp downstream
Tssr65716	transcription start site region 65716	1190 bp downstream
Tssr65717	transcription start site region 65717	1177 bp downstream
Tssr65718	transcription start site region 65718	1151 bp downstream
Tssr65719	transcription start site region 65719	328 bp downstream
Tssr65720	transcription start site region 65720	307 bp downstream
Tssr65721	transcription start site region 65721	250 bp downstream
Tssr65722	transcription start site region 65722	213 bp downstream
Tssr65723	transcription start site region 65723	198 bp downstream
Tssr65724	transcription start site region 65724	144 bp downstream
Tssr65725	transcription start site region 65725	16 bp downstream
Tssr65726	transcription start site region 65726	11 bp downstream
Tssr65727	transcription start site region 65727	4 bp upstream
Tssr65728	transcription start site region 65728	299 bp upstream
Tssr65729	transcription start site region 65729	617 bp upstream
Tssr65730	transcription start site region 65730	665 bp upstream
Tssr65731	transcription start site region 65731	691 bp upstream
Tssr65732	transcription start site region 65732	729 bp upstream
Tssr65733	transcription start site region 65733	757 bp upstream
Tssr65734	transcription start site region 65734	798 bp upstream
Tssr65735	transcription start site region 65735	1597 bp upstream
Tssr65736	transcription start site region 65736	1616 bp upstream
Tssr65737	transcription start site region 65737	1650 bp upstream
Tssr65738	transcription start site region 65738	1706 bp upstream
Tssr65739	transcription start site region 65739	1902 bp upstream
Tssr65740	transcription start site region 65740	1929 bp upstream
Tssr71745	transcription start site region 71745	1985 bp upstream
Tssr71746	transcription start site region 71746	1776 bp downstream