rs8261851 SNP Detail

Summary

• ID
  rs8261851
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30122950 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        ACAAC TCCCATCTCC CCCAGCGCAC
  R
  TGGCGACTTC CAGAGACTCA CCGGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	BALB/cByJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	NZB/BlNJ	NZW/Lac	SM/J
ss12758484	IKBns_JC7152_19	ROCHEBIO	RPAMM	f	SNP	A	G	G	A	G	A	A	G		A	A
ss46030582	mCV22814519	ABI	CRAMUS_MOUSE	r	SNP			C			T		C
ss148677572	ENSMUSSNP1616574	ENSEMBL	ENSEMBL_Sanger	r	SNP			C					C
ss322134128	CHEV_7_31208544	CHEVERUD	SCREENING_POP	r	SNP									T			C
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	BALB/cByJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	NZB/BlNJ	NZW/Lac	SM/J
rs8261851					SNP	A	G	G	A	G	A	A	G	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30122950 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi18799	CpG island 18799	717 bp distal
Cpgi18800	CpG island 18800	within coordinates
Nfkbid	nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, delta	within coordinates
Rr400239	regulatory region 400239	1671 bp downstream
Rr400240	regulatory region 400240	1092 bp downstream
Rr644814	regulatory region 644814	1783 bp distal
Rr644815	regulatory region 644815	1109 bp distal
Rr644816	regulatory region 644816	240 bp distal
Tssr2184	transcription start site region 2184	177 bp downstream
Tssr65714	transcription start site region 65714	1783 bp downstream
Tssr65715	transcription start site region 65715	1230 bp downstream
Tssr65716	transcription start site region 65716	1094 bp downstream
Tssr65717	transcription start site region 65717	1081 bp downstream
Tssr65718	transcription start site region 65718	1055 bp downstream
Tssr65719	transcription start site region 65719	232 bp downstream
Tssr65720	transcription start site region 65720	211 bp downstream
Tssr65721	transcription start site region 65721	154 bp downstream
Tssr65722	transcription start site region 65722	117 bp downstream
Tssr65723	transcription start site region 65723	102 bp downstream
Tssr65724	transcription start site region 65724	48 bp downstream
Tssr65725	transcription start site region 65725	75 bp upstream
Tssr65726	transcription start site region 65726	82 bp upstream
Tssr65727	transcription start site region 65727	100 bp upstream
Tssr65728	transcription start site region 65728	395 bp upstream
Tssr65729	transcription start site region 65729	713 bp upstream
Tssr65730	transcription start site region 65730	761 bp upstream
Tssr65731	transcription start site region 65731	787 bp upstream
Tssr65732	transcription start site region 65732	825 bp upstream
Tssr65733	transcription start site region 65733	853 bp upstream
Tssr65734	transcription start site region 65734	894 bp upstream
Tssr65735	transcription start site region 65735	1693 bp upstream
Tssr65736	transcription start site region 65736	1712 bp upstream
Tssr65737	transcription start site region 65737	1746 bp upstream
Tssr65738	transcription start site region 65738	1802 bp upstream
Tssr65739	transcription start site region 65739	1998 bp upstream
Tssr71745	transcription start site region 71745	1889 bp upstream
Tssr71746	transcription start site region 71746	1872 bp downstream