rs8262875 SNP Detail

Summary

• ID
  rs8262875
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:135757243 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        GCTCC TCTCTCTTCC CTCTCCATCT
  Y
  CTGTCCCCTT CCTTCCCTTG ACTTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MSM/Ms	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12759609	Por_3_AN2826_4	ROCHEBIO	RPAMM	f	SNP	T	T	T	T	T	T	T	T	T	T	T		T	T	C
ss144510675	ENSMUSSNP7100400	ENSEMBL	ENSEMBL_Sanger	r	SNP			A								A	G
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MSM/Ms	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8262875					SNP	T	T	T	T	T	T	T	T	T	T	T	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:135757243 () rs orientation: reverse

Symbol	Name	Function Class
Por	cytochrome p450 oxidoreductase	within coordinates
Rr124528	regulatory region 124528	842 bp distal
Tssr49178	transcription start site region 49178	267 bp upstream
Tssr49179	transcription start site region 49179	1904 bp upstream