rs8262877 SNP Detail

Summary

• ID
  rs8262877
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:135757165 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                              TGCCTCGAAT CACCAGTGCG
  CTTATGGCCA TCGGTCAGCC GCAGGACAGC GCAAGGCTGG CCTGGTTATG TGCCCACGTT
  CTCCTTCTAG CGTCTTGGCT CCTCTCTCTT CCCTCTCCAT CTTCTGTCCC CTTCCTTCCC
  TTGACTTCAT CTCAGGCAGA CAGGGCCCAA GCTGAAAGGT GCTCTAGCTC CAGCCTGAGA
  S
  AGTGAGCCAA TGGGAGATCC AATGGGAGAA AACCAAGTGT GCTCAGGGGA TAGGAGTGTG
  AGATGTGGGC CGGGGTGTAT GGGGGGGGGG GGAGGGCTGT GCATGTGCAG AGATAGCCCA
  GCAACGAAGA GGGCTTGATC CCCAGTCATG AGGATGAGAG TTTGCATCCC ACACCACGAC
  AAGCTGGCCA TCCTGTGCTA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12759611	Por_3_AN2826_6	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8262877					SNP	C	C	C	C	C	C	C	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:135757165 () rs orientation: reverse

Symbol	Name	Function Class
Por	cytochrome p450 oxidoreductase	within coordinates
Rr124528	regulatory region 124528	764 bp distal
Tssr49178	transcription start site region 49178	345 bp upstream
Tssr49179	transcription start site region 49179	1982 bp upstream