rs8262883 SNP Detail

Summary

• ID
  rs8262883
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:135758422 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGACTCCG TGTGTCTGCC
  TTTTCCCTCA GGGAAGGAAC ATTATTGTAT TCTATGGCTC CCAGACGGGA ACCGCGGAGG
  AGTTTGCCAA CCGGCTGTCC AAGGATGCCC ACCGCTATGG GATGCGGGGC ATGTCTGCAG
  ACCCTGAAGA GTATGACTTG GTGAGTGTGC CCCACCCTGC TGCTCAAGTG TGAGGGACCC
  S
  GTGATGCCTC TTCCTCGGCT ATGGAAGGTG TTGAATGGTG TCATCTCAGA GAGCTCTAAG
  CCCGTCTTAT GTTGAGGCTC TTAGTAACTC GTACGTTAAA GCTGAGGACA GAGTCATGGT
  GGGGCTGGGA GAGGCTATGG TTAGGGCCAG TGGAGTCCCT TCTCATCCAT ACGCCATTGT
  GCCCATGCTG TTCCTCACAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/HeJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12759617	Por_3_AN2827_2	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	A/HeJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8262883					SNP	C	C	C	C	C	C	C	C	C	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:135758422 () rs orientation: forward

Symbol	Name	Function Class
Por	cytochrome p450 oxidoreductase	within coordinates
Tssr49178	transcription start site region 49178	901 bp downstream
Tssr49179	transcription start site region 49179	725 bp upstream