rs8262885 SNP Detail

Summary

• ID
  rs8262885
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:135758456 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGAACATTA TTGTATTCTA
  TGGCTCCCAG ACGGGAACCG CGGAGGAGTT TGCCAACCGG CTGTCCAAGG ATGCCCACCG
  CTATGGGATG CGGGGCATGT CTGCAGACCC TGAAGAGTAT GACTTGGTGA GTGTGCCCCA
  CCCTGCTGCT CAAGTGTGAG GGACCCCGTG ATGCCTCTTC CTCGGCTATG GAAGGTGTTG
  R
  ATGGTGTCAT CTCAGAGAGC TCTAAGCCCG TCTTATGTTG AGGCTCTTAG TAACTCGTAC
  GTTAAAGCTG AGGACAGAGT CATGGTGGGG CTGGGAGAGG CTATGGTTAG GGCCAGTGGA
  GTCCCTTCTC ATCCATACGC CATTGTGCCC ATGCTGTTCC TCACAAGCCA GTACAGGATA
  TGGCAGACCC CAGCCATGTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12759619	Por_3_AN2827_4	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	A	A	A	A	A	G	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8262885					SNP	A	A	A	A	A	A	A	A	A	G	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:135758456 () rs orientation: forward

Symbol	Name	Function Class
Por	cytochrome p450 oxidoreductase	within coordinates
Tssr49178	transcription start site region 49178	935 bp downstream
Tssr49179	transcription start site region 49179	691 bp upstream