rs8263021 SNP Detail

Summary

• ID
  rs8263021
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  118
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:135757440 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                CA CTGGTGATTC GAGGCATATG ANGGAGTGNT
  TANACCACTC CCAGCTGTTG GCTCNGCCNC TAGGGCCTAG CACAGGTGGA CTNNCCCCTG
  R
  CAAACTGCCA AGGGTCGCAC AGCCTGTCAC GCCCATCCTG CAACAGCNNN NNNNGTCCCC
  ATCAGACTGT CTTGTTTTTC AGGGCCCCAC CTGTCAAAGA GAGCAGCTTC GTGGAAAAGA
  TGAAGAAAAC NGTGAGACTC CTATTTCTGC TTTTAGNAGA GCATGTGGGT GGTGGGTACC
  AGGGGGGCCC AGGAGAGGGC TNGGCTTCCT GACAGGAGGG CTGAGGGCTN CTGGAACCGA
  GCAGNTCAGN ATGCTAAGGA CATCTTCATC TTACCACAGC AAGAGAA              
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12759758	Por_3_AN2847_6	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8263021					SNP	G	G	G	G	G	G	G	G	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:135757440 () rs orientation: forward

Symbol	Name	Function Class
Por	cytochrome p450 oxidoreductase	within coordinates
Rr124528	regulatory region 124528	1039 bp distal
Tssr49178	transcription start site region 49178	70 bp upstream
Tssr49179	transcription start site region 49179	1707 bp upstream