rs8263029 SNP Detail

Summary

• ID
  rs8263029
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:135757564 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATATGACGG AGTGATTATA
  CCACTCCCAG CTGTTGGCTC TGCCACTAGG GCCTAGCACA GGTGGACTGA CCCCTGGCAA
  ACTGCCAAGG GTCGCACAGC CTGTCACGCC CATCCTGCAA CAGCGTCCCC ATCAGACTGT
  CTTGTTTTTC AGGGCCCCAC CTGTCAAAGA GAGCAGCTTC GTGGAAAAGA TGAAGAAAAC
  R
  GTGAGACTCC TATTTCTGCT TTTAGCAGAG CATGTGGGTG GTGGGTACCA GGGGGGCCCA
  GGAGAGGGCT CGGCTTCCTG ACAGGAGGGC TGAGGGCTAC TGGAACCGAG CAGGTCAGGA
  TGCTAAGGAC ATCTTCATCT TACCACAGCA AGAGAGACTT TAGCTCCTGC AGGTTCTGGT
  ATCTTGTGAA TGGGAATCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	NZW/LacJ	SPRET/EiJ
ss12759766	Por_3_AN2847_14	ROCHEBIO	RPAMM	f	SNP		G	G	G	G		G	G	G	G	G	G	G	G		A
ss20413898	PS02182924	PERLEGEN	MM_PANEL	f	SNP	G	G	G	G		G	G	G	G	G	G	G	G		G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	NZW/LacJ	SPRET/EiJ
rs8263029					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:135757564 () rs orientation: forward

Symbol	Name	Function Class
Por	cytochrome p450 oxidoreductase	within coordinates
Rr124528	regulatory region 124528	1163 bp distal
Tssr49178	transcription start site region 49178	43 bp downstream
Tssr49179	transcription start site region 49179	1583 bp upstream