rs8263030 SNP Detail

Summary

• ID
  rs8263030
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:135757590 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGCTGTTG GCTCTGCCAC
  TAGGGCCTAG CACAGGTGGA CTGACCCCTG GCAAACTGCC AAGGGTCGCA CAGCCTGTCA
  CGCCCATCCT GCAACAGCGT CCCCATCAGA CTGTCTTGTT TTTCAGGGCC CCACCTGTCA
  AAGAGAGCAG CTTCGTGGAA AAGATGAAGA AAACGGTGAG ACTCCTATTT CTGCTTTTAG
  Y
  AGAGCATGTG GGTGGTGGGT ACCAGGGGGG CCCAGGAGAG GGCTCGGCTT CCTGACAGGA
  GGGCTGAGGG CTACTGGAAC CGAGCAGGTC AGGATGCTAA GGACATCTTC ATCTTACCAC
  AGCAAGAGAG ACTTTAGCTC CTGCAGGTTC TGGTATCTTG TGAATGGGAA TCATGGACCC
  TCACAGATAC CAAAGGACCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	C3H/HeJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12759767	Por_3_AN2847_15	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	C3H/HeJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8263030					SNP	C	C	C	C	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:135757590 () rs orientation: forward

Symbol	Name	Function Class
Por	cytochrome p450 oxidoreductase	within coordinates
Rr124528	regulatory region 124528	1189 bp distal
Tssr49178	transcription start site region 49178	69 bp downstream
Tssr49179	transcription start site region 49179	1557 bp upstream