rs8264883 SNP Detail

Summary

• ID
  rs8264883
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:130897937 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAAGCAAGA ACTGAGAAGG
  CAGAGAGGTC CCTGGGTCAT AACGGTGCTG AGCAGGCTCC CGCCCAGCCC AGTCAGACCT
  CTTAGGTCTC TCCTCACCAG GGTGTGGTCA GCCACTATGT ACAGTTCCAG GTACCTGGGA
  CTCCTGCGCG CCTCTCGCCT CACCTGGGAG GAGCAAATGG TGAGGGGCAG GCTGCTTGAC
  Y
  GAATCCTTGG CCACACACCG TGATCCCCCC GGGCAGGGGA GGGGATAGTT AAACTTCTGC
  TCAAACTTGA TTCTTCAGCC TCTGAATTAA AACAGGGAGA CCCCGTCCAG GACCCGCATT
  CCTGTGTCCT CTGCTTTGAA GGACCAGTCC CACTCTAGTC TGTACCCCTT ACCCGGCTCT
  GGGGGACATG AGGAAGACTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12761681	Adam33_2_JC6852_1	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	T	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8264883					SNP	C	C	C	C	C	C	C	C	T	C	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:130897937 () rs orientation: forward

Symbol	Name	Function Class
Adam33	a disintegrin and metallopeptidase domain 33	within coordinates
Cpgi12279	CpG island 12279	383 bp distal
Rr565170	regulatory region 565170	684 bp distal
Rr565171	regulatory region 565171	224 bp distal
Rr565172	regulatory region 565172	356 bp proximal
Tssr26331	transcription start site region 26331	1464 bp upstream
Tssr26332	transcription start site region 26332	187 bp upstream
Tssr26333	transcription start site region 26333	548 bp downstream
Tssr26334	transcription start site region 26334	564 bp downstream