rs8264886 SNP Detail

Summary

• ID
  rs8264886
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:130898311 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCACA ATAAGGCCAC TAGAGTGCAG
  K
  GGATAGCAAG GATGTGTGAA CAGGA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12761684	Adam33_2_JC6853_1	ROCHEBIO	RPAMM	f	SNP	T		T	T	T	T	G	G	T	T	G	T	T	T	G
ss45298845	mCV22650663	ABI	CRAMUS_MOUSE	f	SNP		T									G
ss147597967	ENSMUSSNP3626036	ENSEMBL	ENSEMBL_Sanger	f	SNP		T									G
SNP Consensus Information
SNP					Consensus Type	129/Sv	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8264886					SNP	T	T	T	T	T	T	G	G	T	T	G	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:130898311 () rs orientation: forward

Symbol	Name	Function Class
Adam33	a disintegrin and metallopeptidase domain 33	within coordinates
Cpgi12279	CpG island 12279	757 bp distal
Rr565170	regulatory region 565170	1058 bp distal
Rr565171	regulatory region 565171	598 bp distal
Rr565172	regulatory region 565172	within coordinates
Tssr26331	transcription start site region 26331	1838 bp upstream
Tssr26332	transcription start site region 26332	561 bp upstream
Tssr26333	transcription start site region 26333	174 bp downstream
Tssr26334	transcription start site region 26334	190 bp downstream