rs8264940 SNP Detail

Summary

• ID
  rs8264940
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:130897744 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCGGTCAAC ACCAACTGTA
  TATCCAGAGT CCTGAGAATC TGAGGGAGAG ACCTGCTGAA GCCAGGAACC AGGCACTCAC
  CAGAGCTTTT CAACTGCCTC ACTCCCAACC TTCAGCGCCC TAATCATCCA ACCTGGTCCA
  CGCAATTGGC AACCTCCAGG AGGCGCTGTC TCGTGTGGTT CAAGTTCTGA TGCTGAAGCA
  R
  GAACTGAGAA GGCAGAGAGG TCCCTGGGTC ATAACGGTGC TGAGCAGGCT CCCGCCCAGC
  CCAGTCAGAC CTCTTAGGTC TCTCCTCACC AGGGTGTGGT CAGCCACTAT GTACAGTTCC
  AGGTACCTGG GACTCCTGCG CGCCTCTCGC CTCACCTGGG AGGAGCAAAT GGTGAGGGGC
  AGGCTGCTTG ACCGAATCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12761742	Adam33_2_JC6867_3	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8264940					SNP	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:130897744 () rs orientation: forward

Symbol	Name	Function Class
Adam33	a disintegrin and metallopeptidase domain 33	within coordinates
Cpgi12279	CpG island 12279	190 bp distal
Rr565170	regulatory region 565170	491 bp distal
Rr565171	regulatory region 565171	31 bp distal
Rr565172	regulatory region 565172	549 bp proximal
Tssr26331	transcription start site region 26331	1271 bp upstream
Tssr26332	transcription start site region 26332	2 bp downstream
Tssr26333	transcription start site region 26333	741 bp downstream
Tssr26334	transcription start site region 26334	757 bp downstream