rs8265001 SNP Detail

Summary

• ID
  rs8265001
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:130895563 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGGTGACT ATCTGGGAGC
  ACAAAGGCCC CTCGGCAAAC CACTTCGCGG CCCTCTAGGA GAATTGTGGA GTCCATAGTC
  ACTATGTGCG GCACTAGTGG GTTCGGCTCC CCTCCCTGGC ACAGCAGTTT CCCACACAGA
  GCGTCCCTGG GGAGGAAGTG GAAGGTGGTC AACAACTTGG AGTGTTCCCT CCGCATGCTC
  M
  GCCCTACTTT ACAGCTGCAG ACCCTCAGCA TCACACCTCA CCTCTGAGCA CAAGGCAGGA
  AGCTACCCTT GTGGTCCTGG CCACAGTTCC CTTGCGAATT CCCCATGGAG TTCATCTGCT
  GGAAACATGG CTCTGGGGCC GGCTTGGACC CTGGGGGGAG GGGGAGTAAG AAGCGGGCAG
  CTCGGGCCTC AGTTCCACGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12761803	Adam33_3_JC6881_2	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8265001					SNP	C	C	C	C	C	C	C	C	C	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:130895563 () rs orientation: forward

Symbol	Name	Function Class
Adam33	a disintegrin and metallopeptidase domain 33	within coordinates
Cpgi12279	CpG island 12279	174 bp proximal
Rr565169	regulatory region 565169	1240 bp distal
Rr565170	regulatory region 565170	1669 bp proximal
Tssr26331	transcription start site region 26331	869 bp downstream