rs8265033 SNP Detail

Summary

• ID
  rs8265033
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:130894775 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACAGCCTGG GAGCTCTCAC
  TACATCTAGA GAATAAGGAT CCCATCTAGC TTCCTAAAGC CCCAGCTCCC TGTAGCCTCT
  CACTCTACAA AGCCCTGAAG AGTTCTGAGA AGCAGGAGCC ATGGGGGCAG GCTCAGGAAG
  AGAGACCTGA GCACCGAACC TACCTATTCC ATAGGGGGTC CCTCCTGCAG CACAGTCCCC
  K
  TCGATGACAG AATGTTGGGA GCTGGTAGTA GCACCAGGCT AGGCCAGCCC CAGGGAGCAG
  AGGCAGCAGG AAGCTGAGGA GCATGGCCAA GGGGAAGGCA TCTCGGTCTG TGGAGGGCAG
  GGGTGCTGAG TCTCAAGCAG GCTACTGCCC AGGTGGTTCC TGCCTGCCCC CACCCCACTG
  GCATACTTGC AGACTGTGCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	LP/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
ss12761836	Adam33_3_JC6885_20	ROCHEBIO	RPAMM	f	SNP	T	T	T	T	T	T	T	T	T	T	T			T	T	T		G
ss24747515	Adam33_3_JC6885_21	ROCHEBIO	RPAMM	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	LP/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
rs8265033					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:130894775 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Adam33	a disintegrin and metallopeptidase domain 33			Coding-Synonymous
				Intron
				Noncoding-Transcript-Variant
Cpgi12279	CpG island 12279			962 bp proximal
Rr565169	regulatory region 565169			452 bp distal
Tssr26331	transcription start site region 26331			1657 bp downstream