rs8265554 SNP Detail

Summary

• ID
  rs8265554
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  123
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:26470728 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                              GGAG TTTACCAGCC AGGTGTCAGT TTAAGAGCCA
  CTACAAACAT TAACTTTGTG CTCACAATAG CTTCATGAGC TGGCTGCTAC TGTCCTCATG
  AGAGAAATTA AAAATCCTAA AGATATCATG TTATAAATGT TCACATCCAC CCACCCACCT
  ATCTACCCTC AANTTCAATT TGGTCCTAGC TTCCTCTNGG NCAATGGATT NTTTGGAAAT
  CCAACTCTTA CTAATGAATG CCAGCCATCC ACCAAACATT TGGAGTTTAC CAGCCAGGTG
  TCAGTTTAAG AGCCACTACA AACATTAACT TTGTGCTCAC AATAGCTTCA TGAGCTGGCT
  GCTACTGTCC TCATGAGAGA AATTAAAAAT CCTAAAGATA TCATGTTATA AATGTTCACA
  TCCACCCACC CACCTATCTA CCCTCAANTT CAATTTGGTC CTAGCTTCCT CTNGGNCAAT
  GGATTNTTTG GAAATCCAAC TCTTACTAAT GAATGCCAGC CATCCACCAA ACATTTTCCA
  R
  AACTTCTCTT TGGCCAGCCC TGTANCTCCT GAAAACATTG ACCTCNTTCC CAATAACNGG
  GGNGCAAAAN G                                                     
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C3H/HeJ	CAST/EiJ	LG/J	LP/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12762419	Cyp2b19_JC7266_6	ROCHEBIO	RPAMM	f	SNP	A	A	G			G	G	G	A
ss24747878	Cyp2b19_JC7266_7	ROCHEBIO	RPAMM	f	SNP	A	A	G	G	A	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	C3H/HeJ	CAST/EiJ	LG/J	LP/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8265554					SNP	A	A	G	G	A	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:26470728 () rs orientation: forward

Symbol	Name	Function Class
Cyp2b19	cytochrome P450, family 2, subfamily b, polypeptide 19	within coordinates
D7Mit144	DNA segment, Chr 7, Massachusetts Institute of Technology 144	1303 bp proximal
Gm51442	predicted gene, 51442	within coordinates
Rr643909	regulatory region 643909	1939 bp proximal
Tssr65194	transcription start site region 65194	465 bp upstream