rs8265557 SNP Detail

Summary

• ID
  rs8265557
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:26471116 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAACCCAGT GAAGCACCTT
  TCTTGATGTC TGGACAGAGA GACTTCTGGA GGCCATGGCT TGTTCTGAGT CACCTCTCTC
  ATGCTTGTTA ACAGTCATAG TCCCTACTTG CCAGAGCAAT CTAGACTCCA TGATCAGTGC
  TAGCGGACTA GAGATGCTCT CTCTTGAGTT GGCTCCATCA TGCTCCCACG TGTTGTGTTG
  R
  AGGGTCATGT TTGAGAATCC CCTTTATAGA TGAGTGACAG GCCACATGAT GACATCACAC
  TGCTAGTGAG TAGCGGGGGA CAAGATCACA CTGTGAGTCT AGAAAAGCAC CTCCCCTCCC
  CTTCCCTACT TGTGCTTAAA TTGAGATGAA ATTCATAAAA TGAAGCTGAC AAAATTTTTC
  AGTTACGTAT TCTGAGACAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	MRL/MpJ	NOD/ShiLtJ	NZB/BlNJ	NZW/Lac	PWD/PhJ	WSB/EiJ
ss12762422	Cyp2b19_JC7267_3	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	G	G	G	G	A	G			G		G	G
ss51885207	NES14904445	PERLEGEN	MM_PANEL2	f	SNP			G	G						A		G	G		G			G	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	MRL/MpJ	NOD/ShiLtJ	NZB/BlNJ	NZW/Lac	PWD/PhJ	WSB/EiJ
rs8265557					SNP	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51885207	NES14904445	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:26471116 () rs orientation: forward

Symbol	Name	Function Class
Cyp2b19	cytochrome P450, family 2, subfamily b, polypeptide 19	within coordinates
D7Mit144	DNA segment, Chr 7, Massachusetts Institute of Technology 144	915 bp proximal
Gm51442	predicted gene, 51442	within coordinates
Rr643909	regulatory region 643909	1551 bp proximal
Tssr65194	transcription start site region 65194	77 bp upstream