rs8266405 SNP Detail

Summary

• ID
  rs8266405
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:46400942 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        TCCTG GGAGGGGATA GGGGCTCCTA
  R
  GAAAGCAGTC AGAACTGTTC CTGCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/HeJ	AKR/J	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12763299	Saa2_JC7060_23	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/HeJ	AKR/J	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8266405					SNP	G	G	G	G	G	G	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:46400942 () rs orientation: reverse

Symbol	Name	Function Class
D7Mit28	DNA segment, Chr 7, Massachusetts Institute of Technology 28	172 bp distal
Gm74180	predicted gene, 74180	within coordinates
Saa2	serum amyloid A 2	315 bp upstream
Tssr66700	transcription start site region 66700	314 bp upstream
Tssr66701	transcription start site region 66701	835 bp upstream
Tssr66702	transcription start site region 66702	1898 bp upstream
Tssr66703	transcription start site region 66703	1921 bp upstream
Tssr66704	transcription start site region 66704	1976 bp upstream