rs8266411 SNP Detail

Summary

• ID
  rs8266411
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  118
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:46400860 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                                 AAGCCAN GAGGTTCCAC
  TGAGAGGAAA CACAGCAATC AATNAGTTTC TGTGNCNNGN TCTGCNTCTC ACCTGGTGTC
  TNCTGNGCAG ATCTGGTGGT CTATGGGTNT AGGTGAGAGG AGGCANGCAT TTATGCTGAG
  CCTCCCTNCT CAGGTGAGGG NCAAGGACAG CCTNGCACCN CCCTTGGNAA NACTCCAGNC
  AAGTCATTTC TTGTAAAGAC TGTGACAGAA ATCTTCCCGG TGTCCTGTGA GCTCTTNATN
  CACAGGTCAT TNTCCCTCAT TGTGCAATGG GAGCACNGGA GACAATTTTC TGTGCGGTGG
  CAATCTTCTG GGGNGTAGTA GCCTGGGGTC AACAGTGAGG GGAGAGAGGG TGCCAAGAGG
  AAGGCAGTGT GTGTCCTGGG AGGGGATAGG GGCTCCTANG NAAGCAGTCA GAACTGTTCC
  TGCAGAGAAN ACTCGACTTT NTAANCAATG CTCAGGCTGT CCCTGGTTTT GTtttgtttn
  R
  tnttttgttt tttgtttgtt tgtttgtttg tttAGGACTG ANACTTTAAA CATTTGCTTC
  TTTCTGTCTG TCTATCTCNC CCNCCCTCTT TC                              
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	NZB/BlNJ	SPRET/EiJ
ss12763305	Saa2_JC7060_29	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	A	A	A	A	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	NZB/BlNJ	SPRET/EiJ
rs8266411					SNP	A	A	A	A	A	A	A	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:46400860 () rs orientation: reverse

Symbol	Name	Function Class
D7Mit28	DNA segment, Chr 7, Massachusetts Institute of Technology 28	90 bp distal
Gm74180	predicted gene, 74180	within coordinates
Rr380764	regulatory region 380764	1966 bp downstream
Saa2	serum amyloid A 2	397 bp upstream
Tssr66700	transcription start site region 66700	396 bp upstream
Tssr66701	transcription start site region 66701	917 bp upstream
Tssr66702	transcription start site region 66702	1980 bp upstream