rs8269091 SNP Detail

Summary

• ID
  rs8269091
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30823361 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        AGATG CCTGAGCTTG GGCTAGGGAC
  M
  TGGCTCAGTG AAAGAGTGCT TGCCT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	LP/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
ss12766203	Scn1b_2_JC6493_1	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	C	A			C	C	A		A
ss24753586	Scn1b_2_JC6493_26	ROCHEBIO	RPAMM	r	SNP	G	G	G	G	G	G	G	G	G	T	G	G	G	G	T	T	T
ss46060175	mCV24561622	ABI	CRAMUS_MOUSE	r	SNP			G					G		T
ss322139515	CHEV_7_31908955	CHEVERUD	SCREENING_POP	r	SNP											G					T
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	LP/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
rs8269091					SNP	C	C	C	C	C	C	C	C	C	A	C	C	C	C	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30823361 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi18836	CpG island 18836	1180 bp proximal
Rr645025	regulatory region 645025	1920 bp proximal
Scn1b	sodium channel, voltage-gated, type I, beta	within coordinates