rs8269112 SNP Detail

Summary

• ID
  rs8269112
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30823310 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        GAAAT CCACCAGTAA GAAACTGGGG
  R
  CAGGGCTTAG CAATAGAGCC CTTGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
ss12766224	Scn1b_2_JC6493_22	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	G	A	G	G	G			A	G	G		G
ss46008759	mCV24561624	ABI	CRAMUS_MOUSE	r	SNP			T					C		C
ss322139513	CHEV_7_31908904	CHEVERUD	SCREENING_POP	r	SNP											T				C
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
rs8269112					SNP	A	A	A	A	G	A	G	G	G	G	A	A	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30823310 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi18836	CpG island 18836	1231 bp proximal
Rr645025	regulatory region 645025	1971 bp proximal
Scn1b	sodium channel, voltage-gated, type I, beta	within coordinates