rs8269137 SNP Detail

Summary

• ID
  rs8269137
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:4524590 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGGTGATA TGGAGAAAGG
  TCAGTGTGAG GTCCCAAAGT GGACACTGGG TGGAGCTGCA AGGCATCACG ACCCACTCGA
  GTGCATACCC ATTCGGGTCA GACATTCTTC AACCAGAACG CGGAGTCCAC TGGAAGCCAC
  GCTCCTCGGT CCCATCTACC AATCTTTGTC TCCGACTAGA GCTACGCACT GCCTATCTAT
  K
  CACTGCTAAC CACTACGCTC ACGCCTAAAC CTTGCTGTAG GCAAGTTCCC CCCAACCACA
  GGCCGCTGTC ACCAAGCCCA ACCTGAACCT TTCTGAAATT CTGCCCCACC CATAGGGCTC
  TGCCCATCAC CCTACCACCC CTTTCCAGGG CCTTGGTCCT GCCCCCTTCT GGGTCTCAGA
  GGATTCTTGA ACCCAGAAGC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/HeJ	A/J	AKR/J	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	MRL/MpJ	NZB/BlNJ	SPRET/EiJ
ss12766249	Tnni3_1_JC6504_4	ROCHEBIO	RPAMM	f	SNP	T	T	T	T	T	T	T	T	T	G
SNP Consensus Information
SNP					Consensus Type	A/HeJ	A/J	AKR/J	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	MRL/MpJ	NZB/BlNJ	SPRET/EiJ
rs8269137					SNP	T	T	T	T	T	T	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:4524590 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18237	CpG island 18237	within coordinates
Dnaaf3	dynein, axonemal assembly factor 3	1342 bp downstream
Rr641975	regulatory region 641975	141 bp distal
Rr641976	regulatory region 641976	927 bp proximal
Tnni3	troponin I, cardiac 3	within coordinates
Tssr64335	transcription start site region 64335	1109 bp downstream
Tssr64336	transcription start site region 64336	79 bp upstream
Tssr64337	transcription start site region 64337	222 bp upstream
Tssr70484	transcription start site region 70484	285 bp downstream
Tssr70485	transcription start site region 70485	836 bp downstream
Tssr70486	transcription start site region 70486	1208 bp downstream
Tssr70487	transcription start site region 70487	1225 bp downstream