rs8270073 SNP Detail

Summary

• ID
  rs8270073
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:21873465 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCATC CAGGAAGCTC TGCTCTACCC
  M
  CCCCTCCTAA GGCCACCCAG TCCTG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac
ss12767243	Prss7_JC7802_2	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	A	A	A	C	C
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac
rs8270073					SNP	A	A	A	A	A	A	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:21873465 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21464	CpG island 21464	1259 bp distal
Cpgi21465	CpG island 21465	within coordinates
D9Mit86	DNA segment, Chr 9, Massachusetts Institute of Technology 86	1800 bp proximal
Epor	erythropoietin receptor	within coordinates
Rr675079	regulatory region 675079	1312 bp distal
Rr675080	regulatory region 675080	631 bp distal
Rr675081	regulatory region 675081	597 bp distal
Rr675082	regulatory region 675082	1327 bp proximal
Tssr2805	transcription start site region 2805	140 bp downstream
Tssr88426	transcription start site region 88426	172 bp downstream
Tssr88427	transcription start site region 88427	217 bp downstream
Tssr88428	transcription start site region 88428	1374 bp downstream
Tssr88429	transcription start site region 88429	1399 bp downstream
Tssr88430	transcription start site region 88430	1426 bp downstream