rs8270111 SNP Detail

Summary

• ID
  rs8270111
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:21871249 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        ATGCC TCCTCCGTAG ACTGTTGCTC
  R
  TTCCTGCAGG AATGCTGAAA GTCAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac
ss12767285	Ptgds2_JC7816_2	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	A	A	A	G	G
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac
rs8270111					SNP	A	A	A	A	A	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:21871249 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi21464	CpG island 21464	488 bp proximal
Cpgi21465	CpG island 21465	1509 bp proximal
Epor	erythropoietin receptor	within coordinates
Rr675079	regulatory region 675079	883 bp proximal
Rr675080	regulatory region 675080	1564 bp proximal
Rr675081	regulatory region 675081	1598 bp proximal
Swsap1	SWIM type zinc finger 7 associated protein 1	1689 bp downstream