rs8270114 SNP Detail

Summary

• ID
  rs8270114
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:21870859 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        TCCTC TCAGAGCCAC GCTGGGCAGT
  K
  ACTCAGGCTG GGGACCCAGG GGCAG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	BALB/cJ	C57BL/6J	CAST/EiJ	NZB/BlNJ	NZW/Lac
ss12767288	Ptgds2_JC7816_5	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	T	T
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	BALB/cJ	C57BL/6J	CAST/EiJ	NZB/BlNJ	NZW/Lac
rs8270114					SNP	G	G	G	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:21870859 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi21464	CpG island 21464	878 bp proximal
Cpgi21465	CpG island 21465	1899 bp proximal
Epor	erythropoietin receptor	within coordinates
Rr675079	regulatory region 675079	1273 bp proximal
Rr675080	regulatory region 675080	1954 bp proximal
Rr675081	regulatory region 675081	1988 bp proximal
Swsap1	SWIM type zinc finger 7 associated protein 1	1299 bp downstream