rs8270320 SNP Detail

Summary

• ID
  rs8270320
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  118
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:97097034 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

             AGGAAGCAGT CTCACAATTT GATGACCTTC CNAAATACAT TAAGCCACAC
  CAAATATGAA TTTNTGTTAA CACAAAATAA AAGGATTCAG AAAAAAATAA AAGGAAGAGA
  GAAGAAAAAG GGGTGGGGGA AAGGGCTGAG ACTTAGTAAA AACACACTGG GTTAGGTGGC
  GGGGCTTGTT AGTGAGCACA CTGGNGACAC AGCGGTGCAG CGGACATCTG GGCCCCACAG
  CAGTCCCCAC TGGCCCCTCA TATGCACAAG TGGTGAGCCA GGCTCACTGA TACTGATCGG
  R
  AGAGGTGCAG CATTNNNCCT GTCAGGTAAC CNGACAGTTT TGAGCAGAAG GCCTAGCTGA
  TAATCTTTAT TTCTACTCTT TCACCTCTTA TGCATNTCAG GGTTCCTTGA AGGTTATCAN
  AGGAAATAAA AGCATATCAG CTCCTCTTAT TTAATGTGGC CATCAAAGAT GTTTCTGTTA
  TCTAAGGACA GGTNAGGGNT GGGCAGAACT AAAGGGAGAA GAACNCGGGA AGGGAGGGAG
  GGTGTGTTtt tttttttgtt ttgttttgtt ttTTAAAGCT TTTCATTACT TTTGGGGGGG
  TTGGGGATCA CACAAAAGGG AGGCAGGGAG GGAAC                           
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12767512	Psa_JC7891_3	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8270320					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:97097034 () rs orientation: forward

Symbol	Name	Function Class
Npepps	aminopeptidase puromycin sensitive	within coordinates
Tssr110404	transcription start site region 110404	793 bp downstream