rs8270321 SNP Detail

Summary

• ID
  rs8270321
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  118
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:97097049 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                              AGGAA
  GCAGTCTCAC AATTTGATGA CCTTCCNAAA TACATTAAGC CACACCAAAT ATGAATTTNT
  GTTAACACAA AATAAAAGGA TTCAGAAAAA AATAAAAGGA AGAGAGAAGA AAAAGGGGTG
  GGGGAAAGGG CTGAGACTTA GTAAAAACAC ACTGGGTTAG GTGGCGGGGC TTGTTAGTGA
  GCACACTGGN GACACAGCGG TGCAGCGGAC ATCTGGGCCC CACAGCAGTC CCCACTGGCC
  CCTCATATGC ACAAGTGGTG AGCCAGGCTC ACTGATACTG ATCGGNAGAG GTGCAGCATT
  W
  NNCCTGTCAG GTAACCNGAC AGTTTTGAGC AGAAGGCCTA GCTGATAATC TTTATTTCTA
  CTCTTTCACC TCTTATGCAT NTCAGGGTTC CTTGAAGGTT ATCANAGGAA ATAAAAGCAT
  ATCAGCTCCT CTTATTTAAT GTGGCCATCA AAGATGTTTC TGTTATCTAA GGACAGGTNA
  GGGNTGGGCA GAACTAAAGG GAGAAGAACN CGGGAAGGGA GGGAGGGTGT GTTttttttt
  ttgttttgtt ttgttttTTA AAGCTTTTCA TTACTTTTGG GGGGGTTGGG GATCACACAA
  AAGGGAGGCA GGGAGGGAAC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12767513	Psa_JC7891_4	ROCHEBIO	RPAMM	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8270321					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:97097049 () rs orientation: forward

Symbol	Name	Function Class
Npepps	aminopeptidase puromycin sensitive	within coordinates
Tssr110404	transcription start site region 110404	778 bp downstream