rs8270329 SNP Detail

Summary

• ID
  rs8270329
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:97097259 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTAACCGGA CAGTTTTGAG
  CAGAAGGCCT AGCTGATAAT CTTTATTTCT ACTCTTTCAC CTCTTATGCA TGTCAGGGTT
  CCTTGAAGGT TATCATAGGA AATAAAAGCA TATCAGCTCC TCTTATTTAA TGTGGCCATC
  AAAGATGTTT CTGTTATCTA AGGACAGGTC AGGGCTGGGC AGAACTAAAG GGAGAAGAAC
  M
  CGGGAAGGGA GGGAGGGTGT GTTTTTTTTT TGTTTTGTTT TGTTTTTTAA AGCTTTTCAT
  TACTTTTTGG GGGGTTGGGG ATCACACAGA AGGGAGGCAG GGAGGGAACT ACAATCCTTG
  GTTCAGATTG AGTTATACAG GAAAAGATAC CTTCCTGGTC GGTTCCCATG CCAAAAAGGA
  AAAAGAAAAC CCACTTATAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	LP/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
ss12767521	Psa_JC7891_12	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	C	A	C			C	C	C		C
ss24753916	Psa_JC7891_14	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	LP/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
rs8270329					SNP	C	C	C	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:97097259 () rs orientation: forward

Symbol	Name	Function Class
Npepps	aminopeptidase puromycin sensitive	within coordinates
Tssr110404	transcription start site region 110404	568 bp downstream