rs8270336 SNP Detail

Summary

• ID
  rs8270336
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:97097490 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        TGGGG ATGCTGACCA AAAGGCTGAT
  M
  GCTGGCTCAC ATAGTGGAGC CTGTG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129S1/SvImJ	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	MRL/MpJ	NOD/ShiLtJ	NZB/BlNJ	NZW/LacJ	SM/J	SPRET/EiJ	WSB/EiJ
ss12767528	Psa_JC7893_7	ROCHEBIO	RPAMM	f	SNP	A			C	C	C	A	C	C		A	A	C	C					A		C			C
ss37293075	NES08568243	PERLEGEN	MM_PANEL2	r	SNP		T			G	G		G		T	T		G	T	G	T		G		G		G			G
ss38835316	mCV23218376	ABI	CRAMUS_MOUSE	r	SNP			T		G							T		T
ss132693999	ENSMUSSNP1884644	ENSEMBL	ENSEMBL_Sanger	r	SNP			T		G									T
ss323825109	CHEV_11_97067978	CHEVERUD	SCREENING_POP	r	SNP																	G						G
SNP Consensus Information
SNP					Consensus Type	129/Sv	129S1/SvImJ	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	MRL/MpJ	NOD/ShiLtJ	NZB/BlNJ	NZW/LacJ	SM/J	SPRET/EiJ	WSB/EiJ
rs8270336					SNP	A	A	A	C	C	C	A	C	C	A	A	A	C	A	C	A	C	C	A	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37293075	NES08568243	PERLEGEN	MM_PANEL	r	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:97097490 () rs orientation: reverse

Symbol	Name	Function Class
Npepps	aminopeptidase puromycin sensitive	within coordinates
Tssr110404	transcription start site region 110404	337 bp downstream