rs8273026 SNP Detail

Summary

• ID
  rs8273026
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:104306218 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTCC CTGTGTGTCC TTCCACTGCT
  R
  GTTCCCATGG GTTAAGGATT TCTGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/Lac	PWD/PhJ	SPRET/EiJ	WSB/EiJ
ss12770283	Serpina3k_JC8000_1	ROCHEBIO	RPAMM	f	SNP	G			A	G	A	G	G		A	A		G					A		G
ss39019997	mCV24511986	ABI	CRAMUS_MOUSE	f	SNP			G	A							A		G
ss47259084	NES11403895	PERLEGEN	MM_PANEL2	f	SNP		G		A	G		G		G			G	G	G	G	G	G		A		G
ss138018980	ENSMUSSNP2116319	ENSEMBL	ENSEMBL_Sanger	f	SNP			G	A									G
SNP Consensus Information
SNP					Consensus Type	129/Sv	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/Lac	PWD/PhJ	SPRET/EiJ	WSB/EiJ
rs8273026					SNP	G	G	G	A	G	A	G	G	G	A	A	G	G	G	G	G	G	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47259084	NES11403895	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:104306218 () rs orientation: forward

Symbol	Name	Function Class
Serpina3k	serine (or cysteine) peptidase inhibitor, clade A, member 3K	within coordinates
Tssr114842	transcription start site region 114842	1543 bp downstream
Tssr114843	transcription start site region 114843	858 bp downstream
Tssr114844	transcription start site region 114844	722 bp downstream
Tssr114845	transcription start site region 114845	690 bp downstream
Tssr114846	transcription start site region 114846	601 bp downstream
Tssr114847	transcription start site region 114847	578 bp downstream
Tssr114848	transcription start site region 114848	524 bp upstream
Tssr114849	transcription start site region 114849	551 bp upstream
Tssr114850	transcription start site region 114850	568 bp upstream
Tssr114851	transcription start site region 114851	627 bp upstream
Tssr114852	transcription start site region 114852	684 bp upstream
Tssr114853	transcription start site region 114853	895 bp upstream
Tssr114854	transcription start site region 114854	1038 bp upstream
Tssr117574	transcription start site region 117574	910 bp downstream