rs8273075 SNP Detail

Summary

• ID
  rs8273075
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:104308769 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        AATCA TGAGTAGTTC ATAATCCATA
  R
  CTTGTGGACT AACACATGGG CAATG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C57BL/6J	DBA/2J	LG/J	MRL/MpJ	MSM/Ms	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
ss12770332	Serpina3k_JC8006_18	ROCHEBIO	RPAMM	f	SNP	G		A	A	G	A	G	G	A	G		G		A	A		A
ss24736579	Serpina3k_JC8006_21	ROCHEBIO	RPAMM	f	SNP	G		A	A	G	A	G	G	A	G	A	G		A	A	A	A
ss138019030	ENSMUSSNP6606053	ENSEMBL	ENSEMBL_Sanger	r	SNP		C								C			T
SNP Consensus Information
SNP					Consensus Type	129/Sv	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C57BL/6J	DBA/2J	LG/J	MRL/MpJ	MSM/Ms	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
rs8273075					SNP	G	G	A	A	G	A	G	G	A	G	A	G	A	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:104308769 () rs orientation: reverse

Symbol	Name	Function Class
Serpina3k	serine (or cysteine) peptidase inhibitor, clade A, member 3K	Intron
Tssr114849	transcription start site region 114849	1989 bp downstream
Tssr114850	transcription start site region 114850	1945 bp downstream
Tssr114851	transcription start site region 114851	1872 bp downstream
Tssr114852	transcription start site region 114852	1840 bp downstream
Tssr114853	transcription start site region 114853	1640 bp downstream
Tssr114854	transcription start site region 114854	1470 bp downstream
Tssr114855	transcription start site region 114855	554 bp upstream
Tssr114856	transcription start site region 114856	1610 bp upstream
Tssr114857	transcription start site region 114857	1622 bp upstream
Tssr114858	transcription start site region 114858	1694 bp upstream
Tssr117574	transcription start site region 117574	1601 bp upstream
Tssr117575	transcription start site region 117575	590 bp downstream