rs8274794 SNP Detail

Summary

• ID
  rs8274794
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:31404750 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        TGGCT GGCTAATGTG TCAACCCAGA
  Y
  CCAATGTCTA TGTGGTTGTT TGATT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	BALB/cJ	CAST/EiJ	SPRET/EiJ
ss12772087	Tmprss3_JC8194_4	ROCHEBIO	RPAMM	f	SNP	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129/Sv	BALB/cJ	CAST/EiJ	SPRET/EiJ
rs8274794					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:31404750 () rs orientation: reverse

Symbol	Name	Function Class
Rr525395	regulatory region 525395	1563 bp proximal
Rr525396	regulatory region 525396	1824 bp proximal
Tmprss3	transmembrane protease, serine 3	within coordinates
Tssr5079	transcription start site region 5079	445 bp downstream
Tssr5080	transcription start site region 5080	844 bp downstream